Marina Svičević - Publications

Refereed Journals

  1. S.M. Mijailovich, D. Nedic, M. Svicevic, B. Stojanovic, J. Walklate, Z. Ujfalusi, M.A. Geeves. Modeling the actin. myosin ATPase cross-bridge cycle for skeletal and cardiac muscle myosin isoforms. Biophysical journal 2017, 112(5):984-96. DOI: 10.1016/j.bpj.2017.01.021, ISSN 0006-3495, M21
  2. M. Ivanovic, M. Svicevic, S. Savovic. Numerical solution of Stefan problem with variable space grid method based on mixed finite element/finite difference approach. International Journal of Numerical Methods for Heat & Fluid Flow 2017, DOI: 10.1108/HFF-11-2016-0443, ISSN 0961-5539, М21
  3. Z. Ujfalusi, C.D. Vera, S.M. Mijailovich, M. Svicevic, E.C. Yu, M. Kawana, K.M. Ruppel, J.A. Spudich, M.A. Geeves, L.A. Leinwand. Dilated cardiomyopathy myosin mutants have reduced force-generating capacity. Journal of Biological Chemistry 2018, 293(23):9017-29. DOI: 10.1074/jbc.RA118.001938, ISSN 0021-9258, M21
  4. M. Ivanović, A. Kaplarević-Mališić, B. Stojanović, M. Svičević, S.M. Mijailovich. Machine learned domain decomposition scheme applied to parallel multi-scale muscle simulation. The International Journal of High Performance Computing Applications 2019, 33(5): 885-896. DOI: 10.1177/1094342019833151, ISSN 1094-3420, M21
  5. C.A. Johnson, J. Walklate, M. Svicevic, S.M. Mijailovich, C. Vera, A. Karabina, L.A. Leinwand, M.A. Geeves. The ATPase cycle of human muscle myosin II Isoforms: adaptation of a single mechanochemical cycle for different physiological roles. Journal of Biological Chemistry 2019, 294(39):14267-14278. DOI: 10.1074/jbc.RA119.009825, ISSN 0021-9258, M21
  6. C.D. Vera, C.A. Johnson, J. Walklate, A. Adhikari, M. Svicevic, S.M. Mijailovich, A.C. Combs, S.J. Langer, K.M. Ruppel, J.A. Spudich, M.A. Geeves. Myosin motor domains carrying mutations implicated in early or late onset hypertrophic cardiomyopathy have similar properties. Journal of Biological Chemistry 2019, 294(46):17451-17462. DOI: 10.1074/jbc.RA119.010563, ISSN 0021-9258, M21
  7. S.M. Mijailovich, B. Stojanovic, D. Nedic, M. Svicevic, M.A. Geeves, T.C. Irving, H.L. Granzier. Nebulin and titin modulate cross-bridge cycling and length-dependent calcium sensitivity. Journal of General Physiology 2019, 151(5):680-704. DOI: 10.1085/jgp.201812165, ISSN 0022-1295, M21
  8. B. Stojanovic, M. Svicevic, A. Kaplarevic-Malisic, R.J. Gilbert, S.M. Mijailovich. Multi-scale striated muscle contraction model linking sarcomere length-dependent cross-bridge kinetics to macroscopic deformation. Journal of Computational Science 2020, 39:101062. DOI: 10.1016/j.jocs.2019.101062, ISSN: 1877-7503, M21

 

  1. B. Stojanovic, M. Svicevic, Dj. Nedic, M. Ivanovic, S. M. Mijailovich. Estimating parameters of a model of thin filament regulation in solution using genetic algorithms. Journal of the Serbian Society for Computational Mechanics 2012, 6(1):41-55. ISSN 1820-6530, M53
  2. B. Stojanovic, M. Ivanovic, A. Kaplarević-Malisic, V. Simic, M. Milivojevic, Dj. Nedic, M. Svicevic, N. Milivojevic, S. M. Mijailovich. Multi-modeling and multi-scale modeling as tools for solving complex real-world problems. Journal of Serbian Society for Computational Mechanics 2016, 10(1):34-49. ISSN 1820-6530, M53

Conference Proceedings

 

  1. B. Stojanovic, M. Ivanovic, Dj. Nedic, M. Svicevic. Thin filament regulation in solution - parallelization of stochastic model. Proceedings of the 5th International Conference "Science and Higher Education in Function of Sustainable Development" SED 2012 2012. ISBN 978-86-83573-22-6, M33
  2. S.M. Mijailovich, B. Stojanovic, D. Nedic, M. Svicevic, R.J. Gilbert, M.A. Geeves, T. Irving. Modulation of crossbridge cycling kinetics and length dependent calcium sensitivity by titin and nebulin. Biophysical Journal 2013, 104(2):310a. ISSN 0006-3495, M34
  3. M. Svičević, M. Ivanović. Finite Element Solution of One-Dimensional Stefan Problem. 12th YOUNG RESEARCHERS’ CONFERENCE Materials Science and Engineering 2013. ISBN 978-86-80321-28-8, M33
  4. Dj. Nedić, M. Svičević, B. Stojanović, S. Mijailović. Computational methods for muscle modeling at the molecular level. 12th YOUNG RESEARCHERS’ CONFERENCE Materials Science and Engineering 2013. ISBN 978-86-80321-28-8, M33
  5. M. Svicevic, S.M. Mijailovich, M. Janco, M.A. Geeves. Myosin Binding to Human Cardiac Thin Filaments Containing Tropomyosin Carrying DCM & HCM Mutations; Fitting of Complex Binding Transients. Biophysical Journal 2014, 106(2):769a. ISSN 0006-3495, M34
  6. B. Stojanovic, M. Svicevic, R.J. Gilbert, S.M. Mijailovich. Nonlinear Elasticity of a Crossbridge in Sarcomere Lattice. Biophysical Journal 2014, 106(2):158a. ISSN 0006-3495, M34
  7. D. Nedic, M. Svicevic, B. Stojanovic, M.A. Geeves, T. Irving, R.J. Gilbert, S.M. Mijailovich. Effect of Mutations in cMyBP-C on Sarcomere Mechanical Function. Biophysical Journal 2015, 108(2):200a. ISSN 0006-3495, M34
  8. S.M. Mijailovich, D. Nedic, M. Svicevic, B. Stojanovic, M.A. Geeves. Modelling the calcium dependent actin-myosin ATP-ase cycle in solution. Biophysical Journal 2015 Jan 27;108(2):594a. ISSN 0006-3495, M34
  9. Kaplarević-Mališić, M. Ivanović, B. Stojanović, M. Svičević, D. Antonijević. Employing phenomenological model in load-balancing optimization of parallel multi-scale muscle simulations. 15th International Conference on Bioinformatics and Bioengineering (BIBE) 2015. DOI: 10.1109/BIBE.2015.7367673, ISBN  978-1-4673-7982-3, М34
  10. Stojanovic, M. Svicevic, A. Kaplarevic-Malisic, M. Ivanovic, D. Nedic, N. Filipovic, S.M. Mijailovich. Coupling finite element and huxley models in multiscale muscle modeling. 15th International Conference on Bioinformatics and Bioengineering (BIBE) 2015. DOI: 10.1109/BIBE.2015.7367674, ISBN  978-1-4673-7982-3, М34
  11. S.M. Mijailovich, D. Nedic, M. Svicevic, B. Stojanovic, M. Regnier, M.A. Geeves. Dynamic Transient Responses of Muscle Fibers with a Heterogeneous Populations of Isoforms and Mutation. Biophysical Journal 2016, 110(3):299a. ISSN 0006-3495, M34
  12. S.M. Mijailovic, D. Nedic, M. Svicevic, B. Stojanovic, M.A. Geeves, M. Regnier. Tuning Cardiomyocite Dynamic Transient Responses with a Heterogeneous Populations of cTnC Mutations. Biophysical Journal 2017, 112(3):256a. ISSN 0006-3495, M34
  13. S.M. Mijailovich, M. Svicevic, D. Nedic, B. Stojanovic, J. Walklate, Z. Ujfalusi, M.A, Geeves. Modeling the ATPase Cycle of Human Myosin II Isoforms and their Mutations. Biophysical Journal 2017, 112(3):265a. ISSN 0006-3495, M34
  14. M.A. Geeves, Z. Ujfalusi, C. Vera, S.M. Mijailovich, M. Svicevic, L. Leinwand. ATPase Cycle Analysis Predicts that Mutations Linked to Dilated Cardiomyopathy in Human Beta Myosin Will Impair Force Generation. Biophysical Journal 2018, 114(3):210a. ISSN 0006-3495, M34
  15. Stojanovic, A. Kaplarevic-Malisic, M. Svicevic, S.M. Mijailovich. Assessing the effects of muscle disease on force generation using multi-scale muscle model. 14th Serbian Mathematical Congress 2018. M34